Table 2

Degree of CCRG compared with random genes
mean of CCRG mean of random genes fold* p value#
BIND 9.24444 3.65349 2.53031 0.002
IntAct 22.01515 7.31961 3.0077 <0.001
MINT 9.77358 5.26234 1.85727 0.021
HPRD 26.10526 7.71614 3.3832 <0.001
BioGRID 24.86486 7.03614 3.53388 <0.001
OPHID 43.71429 12.2352 3.57283 <0.001

*fold is the result of mean degree of CCRG divided by that of random genes.

#1000 random gene sets was selected from network, each randomization kept the number of selected genes same as that of real genes. Then for CCRG, p value was calculated over 1000 randomization.

Chen et al.

Chen et al. BMC Medical Genomics 2012 5:43   doi:10.1186/1755-8794-5-43

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