Additional file 3.

Supplemental Figure 2: Concordance of matching probes between array platforms. We compared the LMT, Affymetrix FlashTag HSR and Agilent microRNA microarray platforms to one another looking at matching direction of the fold change (up or down). Of the 3 planar microarray platforms, the Affymetrix FlashTag HSR had the highest number of combined up and down regulated miRNA at 111 followed by Agilent with 101 and LMT with 78. Ninety-one, 91, up and down -regulated miRNAs were shared between Agilent and Affymetrix FlashTag HSR, 74 were shared LMT and Affymetrix FlashTag HSR, and 74 were shared between LMT and Agilent.

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Kim et al. BMC Medical Genomics 2011 4:79   doi:10.1186/1755-8794-4-79