Table 4

Detailed overview of frequent DNA copy number aberrations (>30%) of tumors from native SA patients.

chromosomal aberrations

flanking clones

position (bp)

segment size

gains

losses

start

end

start

end

(Mb)


3p14.2

RP11-734E15

RP11-137N22

59105371

61252524

2.15

4q35.2

RP11-354H17

CTC-963K6

190095484

191158370

1.06

7p22.3-p11.2

RP11-713A20

RP11-80l24

106471

55784518

55.68

7q22.1

RP11-10D8

RP11-163M5

98067793

101528379

3.46

8q24.3

RP11-472K18

RP5-1109M23

144481535

146238749

1.76

9q33.3-q34.3

RP11-91G7

RP11-424E7

124316484

138363252

14.05

17q12-q21.31

RP11-893G17

RP11-392O1

31506328

39091575

7.59

17q21.32-q21.33

RP1-62O9

RP11-506D12

44647598

46333070

1.69

17q23.2-q25.3

RP11-579A4

RP11-258N23

54149948

78451750

24.30

19p13.3

RP11-110A24

CTC-1482H14

134914

5154803

5.02

19p13.2-p13.11

RP11-197O4

RP11-88I12

10248852

19023254

8.77

19q12-q13.34

CTC-1459F4

GS1-1129C9

32889410

63771717

30.88

20p13-q13.33

RP11-530N10

CTB-81F12

9943

62393015

62.38


Buffart et al. BMC Medical Genomics 2011 4:7   doi:10.1186/1755-8794-4-7

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