Table 1

Comparison of different gene selection methods based on accuracy

Methods


dataset

M1

M2

M3

M4

M5

M6

M7

M8

M9

M10


Colon

86.1

86.8

89.9

91.6

89.7

91.8

93.3

91.2

93.2

94.7


DLBCL

89.2

89.6

91.9

93.7

92.5

94.4

95.8

93.6

95.4

96.8


Prostate

80.7

91.1

92.8

93.1

92.2

93.8

94.2

93.8

95.1

95.9


M1 = No-sel: classification without gene selection

M2 = Fisher: classification after using Fisher criteria for gene selection

M3 = Fisher-R: classification after using Fisher criteria and redundancy reduction greedy approach for gene selection

M4 = Fisher-RG: classification after using Fisher criteria and redundancy reduction greedy approach considering Gene Ontology information for gene selection

M5 = SVMRFE: classification after using SVMRFE algorithm

M6 = SVMRFE-R: classification after using SVMRFE algorithm and redundancy reduction greedy approach for gene selection

M7 = SVMRFE-RG: classification after using SVMRFE algorithm and redundancy reduction greedy approach considering Gene Ontology information for gene selection

M8 = Fisher-SVMRFE: classification after using combination of Fisher criteria and SVMRFE algorithm for gene selection

M9 = Fisher-R-SVMRFE: classification after using proposed framework without considering Gene Ontology for gene selection

M10 = Fisher-RG-SVMRFE: classification after using proposed framework for gene selection

Mohammadi et al. BMC Medical Genomics 2011 4:12   doi:10.1186/1755-8794-4-12

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