Table 2

Parameters for correlation between ATAC-PCR and real time PCR.

gene name

correlation coefficient

regression coefficient

intercept


IGFBP2

0.90

0.27

0.32

VMP1

0.04

0.05

2.87

MSN

0.81

0.36

1.00

TIMP1

0.92

0.30

-0.31

LGALS1

0.85

0.36

-0.56

CD63

0.51

0.20

-0.52

NES

0.69

0.26

0.69

CLIC1

0.86

0.43

0.34

TNC

0.04

-0.02

-0.63

TAGLN2

0.66

0.34

0.13

HES6

0.77

0.29

0.60

VEGF

0.78

0.25

-0.11

VIM

0.77

0.30

-0.52

LDHA

0.73

0.33

-0.12

RPIP8

0.81

0.26

0.71

IFITM3

0.85

0.38

-0.75

PPIB

0.60

0.29

-0.10

ALDOC

0.73

0.28

-0.09

ZYX

0.68

0.36

0.54

UPAR

0.84

0.36

1.48

LAMB2

0.43

0.23

0.62

RTN1

0.82

0.29

0.66

HMOX1

0.87

0.30

0.62

GM2A

0.51

0.24

0.62

S100A10

0.79

0.28

-0.18

BRSK2

0.68

0.22

1.21

MRCL3

0.73

0.30

0.38

GPX1

0.70

0.33

-0.41

SOD2

0.74

0.31

0.23

RHOC

0.11

-0.08

-0.06


Kawarazaki et al. BMC Medical Genomics 2010 3:52   doi:10.1186/1755-8794-3-52

Open Data