Open Access Research article

Literature-based discovery of diabetes- and ROS-related targets

Junguk Hur12, Kelli A Sullivan2, Adam D Schuyler4, Yu Hong2, Manjusha Pande23, David J States5, H V Jagadish13 and Eva L Feldman123*

Author Affiliations

1 Bioinformatics Program, University of Michigan, Ann Arbor, MI 48109, USA

2 Department of Neurology, University of Michigan, Ann Arbor, MI 48109, USA

3 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109, USA

4 Department of Molecular, Microbial and Structural Biology, University of Connecticut Health Center, Farmington, CT 06030, USA

5 School of Health Information Science, University of Texas, Houston, TX 77030, USA

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BMC Medical Genomics 2010, 3:49  doi:10.1186/1755-8794-3-49

Published: 27 October 2010

Additional files

Additional file 1:

The list of 90 genes from the NCBI Gene2PubMed database for the ROS-Diabetes literature (1,154 papers).

Format: XLS Size: 35KB Download file

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Additional file 2:

The list of 1,026 ROS-Diabetes targets.

Format: XLS Size: 229KB Download file

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Additional file 3:

The enriched Molecular Functions Gene Ontology Terms in the 1,026 ROS-Diabetes targets.

Format: XLS Size: 91KB Download file

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Additional file 4:

The enriched Biological Processes Gene Ontology Terms in the 1,026 ROS-Diabetes targets.

Format: XLS Size: 95KB Download file

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Additional file 5:

The enriched Cellular Components Gene Ontology Terms in the 1,026 ROS-Diabetes targets.

Format: XLS Size: 61KB Download file

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Additional file 6:

The enriched pathways in the 1,026 ROS-Diabetes targets.

Format: XLS Size: 104KB Download file

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Additional file 7:

Comparisons of target frequencies among three background sets.

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Additional file 8:

The enriched Molecular Functions Gene Ontology Terms in the Over-represented 53 ROS-Diabetes targets.

Format: XLS Size: 46KB Download file

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Additional file 9:

The enriched Biological Processes Gene Ontology Terms in the Over-represented 53 ROS-Diabetes targets.

Format: XLS Size: 95KB Download file

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Additional file 10:

The enriched Cellular Components Gene Ontology Terms in the Over-represented 53 ROS-Diabetes targets.

Format: XLS Size: 66KB Download file

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Additional file 11:

The enriched pathways in the Over-represented 53 ROS-Diabetes targets.

Format: XLS Size: 75KB Download file

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Additional file 12:

The Key 53 ROS-Diabetes Targets Identifiable Using Only the Abstracts.

Format: XLS Size: 23KB Download file

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