Table 1

Transcription factors identified within the sub-networks

Transcription Factor

Description

Sub-network


ELF3

E74-like factor 3

1


MTF2

metal response element binding transcription factor 2

1


ZEB1

zinc finger E-box binding homeobox 1

1


SMAD3

SMAD family member 3

1


KLF4

Kruppel-like factor 4 (gut)

1


KLF5

Kruppel-like factor 5 (intestinal)

1


CTBP2

C-terminal binding protein 2

1


GLI2

GLI family zinc finger 2

1


SQSTM1

sequestosome 1

2


ID1

inhibitor of DNA binding 1

2


HTATIP2

HIV-1 Tat interactive protein 2, 30kDa

2


SMARCC1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

2


ARID1A

AT rich interactive domain 1A (SWI-like)

2


MSX2

msh homeobox 2

2


IFI16

interferon, gamma-inducible protein 16

2


JARID2

AT rich interactive domain 2

2


E2F3

E2F transcription factor 3

2


IRF6

interferon regulatory factor 6

3


Table 1 lists the 18 transcription factors identified within the enriched sub-networks. The corresponding descriptions and locations within the sub-networks are included.

Liu et al. BMC Medical Genomics 2010 3:37   doi:10.1186/1755-8794-3-37

Open Data