Table 2

The details of SNVs analyzed in the study

Target

SNV

Primers

Enzyme

Fragments

Allele

Present in copies


DAZ Genes SNVs

I

SA770

Fsp I

709

A

1,2,3

SA771

398+311

B

4


II (sY586)

SA446

Mbo I

182

A

1

SA447

122+60

B

2,3,4


III

SA772

Taq I

301

A

2

SA773

184+117

B

1,3,4


IV

SA774

Alu I

630

A

2

SA775

398+262

B

1,3,4


V (sY587)

SA444

Dra I

195+49

A

3,4

SA445

122+73+49

B

1,2


VI

SA776

Afl III

431

A

1,2,3

SA777

248+183

B

4


sY581

SA442

Sau3a

189+63

A

1,4

SA443

130+63+59

B

2,3


Blue Amplicons

b2_AZFc_SFV

SA1237

MnlI

653

A

b1, b3, b4

SA1238

452+197

B

b2


b3_AZFc_SFV

SA1239

XmaJI

510

A

b1, b2, b4

SA1240

261+249

B

b3


b4_AZFc_SFV

SA1241

HphI

630

A

b1, b2, b3

SA1242

347+282

B

b4


Green Amplicons

g1_AZFc_SFV

SA1243

Alw261

500

A

g2, g3

SA1244

272+224

B

g1


g2_AZFc_SFV

SA1245

NmuCI

274+180+38

A

g2

SA1246

274+137+38+28

B

g1, g3


g3_AZFc_SFV

SA1247

Alw261

400

A

g3

SA1248

251+163

B

g1, g2


Gr Amplicons

g_AZFc_SFV

SA1249

Eco1051

440

A

Gr1

SA1250

311+129

B

Gr2


GOLGA2LY Genes

GOLY/I

SA768

HhaI

531

A

1 copy

SA769

289+242

B

1 copy


BPY2 Genes

BPY2/I

SA766

EcoRV

470

A

2 copies

SA767

289+181

B

I copy


TTY4 Genes

TTY4/I

SA764

HaeIII

541

A

1 copy

SA765

323+218

B

2 copies


Ali and Ali BMC Medical Genomics 2010 3:35   doi:10.1186/1755-8794-3-35

Open Data