Table 2

Breast NEPS Genes

Gene Symbol

Gene Name

Average Raw Tag Count

Permutation Score


EIF5A

eukaryotic translation initiation factor 5A

22

0.003

EIF3S2

eukaryotic translation initiation factor 3, subunit 2 beta, 36 kDa

12

0.037

RPS8

ribosomal protein S8

122

0.046

TSPAN9

tetraspanin 9

122

0.051

UBB

ubiquitin B

39

0.057

RPL28

ribosomal protein L28

78

0.064

FTL

ferritin, light polypeptide

16

0.066

YWHAQ

tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide

19

0.074

TMEM49

transmembrane protein 49

13

0.083

FAM39B

family with sequence similarity 39, member B

11

0.091

NINJ1

ninjurin 1

13

0.097

RPL30

ribosomal protein L30

108

0.108

PDE6B

phosphodiesterase 6B, cGMP-specific, rod, beta

10

0.115

TUBA3

tubulin, alpha 1a

50

0.117

MYL9

myosin, light chain 9, regulatory

15

0.120

MYH9

myosin, heavy chain 9, non-muscle

21

0.128

NPM1

nucleophosmin (nucleolar phosphoprotein B23, numatrin)

48

0.130

HLA-A

major histocompatibility complex, class I, A

45

0.131

RPS2

ribosomal protein S2

63

0.138


Chari et al. BMC Medical Genomics 2010 3:32   doi:10.1186/1755-8794-3-32

Open Data