Table 1

Known SNP - disease associations


Gene

IBD

Psoriasis

Rheumatoid arthritis


ADAM33

NA

rs512625 PMID: 18560587

NA


IL10

rs3024505 PMID: 18836448

NA

rs1800896 PMID: 18615156


IL13

NA

rs1800925 PMID: 19554022

NA


IL23R

rs2201841 PMID: 18338763

rs11209026 PMID: 18369459

NA


IL4

rs2243250 PMID: 18064451

NA

NA


IL8

NA

NA

PMID: 18799095


PADI4

NA

NA

rs2240340 PMID: 12833157


PTGS2

rs20432 PMID: 16273614

NA

rs5275 PMID: 18381795


PTPN22

NA

rs1217414 PMID: 18341666

rs2476601 PMID: 18466513


SLC22A4

rs3792876 PMID: 17476680

rs11568506 PMID: 18614543

rs3792876 PMID: 15107849


SLC22A5

rs3792876 PMID: 17476680

rs2631367 PMID: 16255050

rs2631367 PMID: 15107849


Known associations between single nucleotide polymorphisms and chronic inflammatory diseases are shown in the table with SNP ID and PMID number referring to the publication that documents the association. NA means there is no documented association on SNP level. Bold cells mean we could detect the association in our study between that specific disease and healthy controls.

Mesko et al. BMC Medical Genomics 2010 3:15   doi:10.1186/1755-8794-3-15

Open Data