Table 3

qRT-PCR on multiple sclerosis patients and normal controls

Gene Name

Ct-avg

SD

CV

n


TRAP1

25.72

0.62

0.024

40

B2M

17.93

0.78

0.044

40

DECR1

25.72

0.79

0.031

40

PPIB

24.67

0.82

0.033

40

FPGS

27.88

0.84

0.030

40

HMBS

29.02

0.94

0.032

40

FARP1

35.79

0.98

0.027

35

MAPRE2

27.39

1.01

0.037

40

PEX16

27.95

1.09

0.039

40

GINS2

32.42

1.10

0.034

40

ACTB

36.66

1.11

0.030

23

GAPDH

22.07

1.32

0.060

40

CRY2

29.73

1.37

0.046

40

CSNK1G2

28.64

1.49

0.052

40

A4GALT

34.92

1.69

0.048

32


Average raw Cycle threshold values (Ct-avg), standard deviation (SD), coefficient of variability (CV) and sample size (n) for the qRT-PCR analyses of RNA samples from 20 patients with multiple sclerosis compared to 20 age and gender matched control subjects. Because those samples that had a SD > 1.41 for the duplicates were excluded from the analysis, the sample size is less than 40 for some of the genes.

Stamova et al. BMC Medical Genomics 2009 2:49   doi:10.1186/1755-8794-2-49

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