Table 2

Expression levels of select transcription factors in the MPSS dataset

Gene id

Symbols

Description

Islet1

Islet2

Average


3110

HLXB9

Homeobox HB9

49

66

57

6927

HNF1

Transcription factor 1, hepatic

46

0

23

3170

HNF3

Forkhead box A2

63

232

147

6925

HNF4

Transcription factor 4

14

23

18

3175

HNF6

One cut domain, family member 1

6

3

4.5

3651

IPF1

Insulin promoter factor 1

38

48

43

3670

ISL1

ISL1 transcription factor, LIM/homeodomain

114

82

98

389692

MAFA

v-maf oncogene homolog A

169

80

124

4760

NEUROD1

Neurogenic differentiation 1

12

66

39

4821

NKX2-2

NK2 transcription factor related, locus 2

205

36

120

4825

NKX6-1

NK6 transcription factor related, locus 1

67

90

78

5080

PAX6

Paired box gene 6

418

713

565


'Gene id' = Entrez Gene ids, 'Symbols' = HUGO names for each gene, 'Description' = detailed gene name, 'Islet1' = tpm counts in MPSS sample from islet 1, 'Islet2' = tpm counts in MPSS sample from islet 2, 'Average' = average tpm counts in MPSS sample in both samples

Kutlu et al. BMC Medical Genomics 2009 2:3   doi:10.1186/1755-8794-2-3

Open Data