Technical advance
Identification of microbial DNA in human cancer
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* Corresponding author: Hai Yan hai.yan@duke.edu
1 Preston Robert Tisch Brain Tumor Center, Pediatric Brain Tumor Foundation Institute, Department of Pathology, Duke University Medical Center, Durham, North Carolina 27710, USA
2 The Ludwig Center for Cancer Genetics and Therapeutics and The Howard Hughes Medical Institute, The Johns Hopkins Kimmel Cancer Center, Baltimore, Maryland 21231, USA
3 Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, Maryland 20852, USA
4 Department of Neurosurgery, Johns Hopkins University Medical School, Baltimore, MD 21231, USA
5 Division of Cancer Prevention, National Cancer Institute, Bethesda, Maryland 20892-7322, USA
BMC Medical Genomics 2009, 2:22 doi:10.1186/1755-8794-2-22
Published: 8 May 2009Additional files
Additional file 1:
Table S1.1, Bacterial and Viral Virtual Tag Library. Library contains 21 bp NlaIII tags closest to SacI sites from indicated bacterial or viral databases (bacterial genomes obtained from http://ftpgib.genes.nig.ac.jp webcite; viral genomes obtained from ftp://ftp.ncbi.nih.gov/refseq/release/viral/ webcite) which are not present in the human genome sequence (Build 36, March 24 2008). File 1 of 3.
Format: XLS Size: 10.9MB Download file
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Additional file 2:
Table S1.2, Bacterial and Viral Virtual Tag Library. Library contains 21 bp NlaIII tags closest to SacI sites from indicated bacterial or viral databases (bacterial genomes obtained from http://ftpgib.genes.nig.ac.jp webcite; viral genomes obtained from ftp://ftp.ncbi.nih.gov/refseq/release/viral/) which are not present in the human genome sequence (Build 36, March 24 2008). File 2 of 3.
Format: XLS Size: 10.7MB Download file
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Additional file 3:
Table S1.3, Bacterial and Viral Virtual Tag Library. Library contains 21 bp NlaIII tags closest to SacI sites from indicated bacterial or viral databases (bacterial genomes obtained from http://ftpgib.genes.nig.ac.jp webcite; viral genomes obtained from ftp://ftp.ncbi.nih.gov/refseq/release/viral/) which are not present in the human genome sequence (Build 36, March 24 2008). File 3 of 3.
Format: XLS Size: 10.8MB Download file
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Additional file 4:
Table S2, Identification of microbial DNA sequences using DK-MICROBE. Table of microbial DNA tag sequences observed in the DK-MICROBE human cancer screening.
Format: XLS Size: 56KB Download file
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