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A systems biology approach to construct the gene regulatory network of systemic inflammation via microarray and databases mining

Bor-Sen Chen*, Shih-Kuang Yang, Chung-Yu Lan and Yung-Jen Chuang

BMC Medical Genomics 2008, 1:46 doi:10.1186/1755-8794-1-46

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Constructing gene regulatory networks for long term photosynthetic light acclimation in Arabidopsis thaliana

Cheng-Wei Yao, Ban-Dar Hsu, Bor-Sen Chen BMC Bioinformatics 2011, 12:335 (11 August 2011)

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Dynamic cross-talk analysis among TNF-R, TLR-4 and IL-1R signalings in TNFα-induced inflammatory responses

Shih-Kuang Yang, Yu-Chao Wang, Chun-Cheih Chao, Yung-Jen Chuang, Chung-Yu Lan, Bor-Sen Chen BMC Medical Genomics 2010, 3:19 (24 May 2010)

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Integrated cellular network of transcription regulations and protein-protein interactions

Yu-Chao Wang, Bor-Sen Chen BMC Systems Biology 2010, 4:20 (8 March 2010)

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Protopia: a protein-protein interaction tool

Alejandro Real-Chicharro, Iván Ruiz-Mostazo, Ismael Navas-Delgado, Amine Kerzazi, Othmane Chniber, Francisca Sánchez-Jiménez, Miguel Medina, José F Aldana-Montes BMC Bioinformatics 2009, 10(Suppl 12):S17 (15 October 2009)

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