Table 1 |
||||
|
Summary of HIP2 database. The numbers of peptides and proteins represent unique entries that are the union of multiple subjects, possibly from different ethnic groups. |
||||
|
Source |
Platform |
Peptides |
Proteins |
Search Software |
|
|
||||
|
HUPO PPP (3,020 proteins and 47,950 peptides) |
ESI-MS/MS_DECA |
712 |
348 |
SEQUEST |
|
ESI-MS/MS_DECAXP |
5796 |
2149 |
SEQUEST |
|
|
ESI-MS/MS_LCQ |
1818 |
427 |
SEQUEST/SONAR |
|
|
ESI-MS/MS_QSTAR |
309 |
137 |
SEQUEST |
|
|
ESI-MS/MS_QTOF |
5078 |
573 |
MASCOT |
|
|
ESI-MS/MS_QTRAP |
195 |
51 |
MASCOT |
|
|
MALDI_MS/MS_QSTAR |
384 |
60 |
SEQUEST/MASCOT |
|
|
David Clemmer's group (9,087 proteins and 37,842 peptides) |
IMS_MS/MS_TOF |
35781 |
9,087 |
MASCOT |
|
PeptideAtlas (788 proteins and 6,039 peptides) |
ESI-MS/MS_DECA |
260 |
110 |
SEQUEST |
|
ESI-MS/MS_DECAXP |
317 |
159 |
SEQUEST |
|
|
ESI-MS/MS_LCQ |
1101 |
263 |
SEQUEST |
|
|
ESI-MS/MS_QSTAR |
14 |
14 |
SEQUEST |
|
|
ESI-MS/MS_QTOF |
728 |
215 |
SEQUEST |
|
|
LC_MS/MS* |
1153 |
250 |
SEQUEST |
|
|
Leigh Anderson's group (1,175 proteins) |
2DEMS & LC_MS/MS* |
---- |
928 |
SEQUEST |
|
|
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|
*Not defined |
||||
|
Saha et al. BMC Medical Genomics 2008 1:12 doi:10.1186/1755-8794-1-12 |
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