Table 2 |
|||||
|
Comparison of QTL mapping results |
|||||
|
Method |
Authors |
QTL detected |
False positives |
Missing QTL (a) |
Mean distance to the QTL (cM) |
|
|
|||||
|
GBLUP |
Zeng |
5 |
0 |
3,5,8 |
1.32 |
|
BayesB |
Zeng |
6 |
3 |
7,8 |
1.21 |
|
BayesC |
Dashab |
7 |
2 |
8 |
0.96 |
|
BayesCπ |
Schurink |
5 |
0 |
5,6,8 |
0.83 |
|
Zeng |
5 |
1 |
6,7,8 |
0.45 |
|
|
LASSO1 |
Usai |
7 |
Numerous |
6 |
0.83 |
|
LASSO2 |
Usai |
7 |
Numerous |
6 |
0.74 |
|
LASSO3 |
Usai |
7 |
Numerous |
6 |
0.29 |
|
MM single SNP |
Dashab |
5 |
3 |
3,6,8 |
0.73 |
|
MM Haplotype |
Dashab |
5 |
6 |
2,6,8 |
0.61 |
|
MM Phylogeny |
Dashab |
7 |
5 |
8 |
1.07 |
|
EMMAX |
Fu |
3 |
1 |
3,5,6,7,8 |
0.43 |
|
|
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|
(a) 2: Chr2, 81,9cM; 3: Chr2, 93,75cM; 5: Chr3, 15cM; 6: Chr4, 32,2cM; 7: Chr5, 36,3cM; 8:Chr5, 99,2cM. |
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|
Demeure et al. BMC Proceedings 2012 6(Suppl 2):S2 doi:10.1186/1753-6561-6-S2-S2 |
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