Table 2

Rank and nominal p-value from the association test between Q1 and the genes in the VEGF pathway included in the simulating model for Q1

ARNT

ELAVL4

FLT1

FLT4

HIF1A

HIF3A

KDR

VEGFA

VEGFC


Rank

112

1,007

1

1,013

698

544

34

985

214

p-value

0.009

0.1359

2.4 × 10−13

0.1441

0.0885

0.0616

0.0017

0.1380

0.0186


The smallest p-value from either single SNP association of common variants or aggregate of rare variants within a gene was chosen to represent the gene. All models were adjusted for age, sex, smoking, and principal components.

Ngwa et al. BMC Proceedings 2011 5(Suppl 9):S18   doi:10.1186/1753-6561-5-S9-S18

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