Table 3

Post-marker-analysis (PMA) results: region where a significant signal was observed for each of the three latent variables: asymptote (ASYM), inflection point (XMID) and scaling factor (SCAL). Region size indicates the number of SNPs in a window.

latent variable

region size

Pr(1)a

Pr(>1)b

FDR

Marker Start

Marker End

ASYM

1

1.00

0.00

0.00

all_0.4447

all_0.4447

2

1.00

0.00

0.00

all_1.0359

all_1.0516

5

1.00

0.18

0.00

all_1.8834

all_1.9011

10

0.91

0.09

0.02

all_3.5612

all_3.7344

XMID

10

0.98

0.04

0.02

all_0.4029

all_0.4831

7

0.98

0.03

0.02

all_0.3410

all_0.3970

SCAL

1

1.00

0.00

0.00

all_1.4852

all_1.4852

1

1.00

0.00

0.00

all_3.0827

all_3.0827

3

1.00

0.09

0.00

all_3.8517

all_3.8701

1

1.00

0.00

0.00

all_0.9137

all_0.9137

5

0.97

0.16

0.01

all_2.2809

all_2.3180

5

0.75

0.23

0.05

All_4.1332

all_4.2895


a probability of presence of a QTL

b probability of more than one QTL

Heuven and Janss BMC Proceedings 2010 4(Suppl 1):S12   doi:10.1186/1753-6561-4-S1-S12

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