Table 2

Mean (SD) differencea in -log10(p-value) based on a test of association using complete data and a test of association using the imputed data

Scenario 1

Scenario 2


IMPUTE

0.352 (1.26)

0.078 (0.493)

MACH

0.363 (1.27)

0.093 (0.543)

PLINK

0.509 (1.55)

0.054 (0.617)

fastPHASE

0.483 (1.70)

0.046 (0.633)


aDifference = (imputed data -log10(p-value)) - (complete data -log10(p-value))

Biernacka et al. BMC Proceedings 2009 3(Suppl 7):S5  

Open Data