Table 2 |
||
|
Mean (SD) differencea in -log10(p-value) based on a test of association using complete data and a test of association using the imputed data |
||
|
Scenario 1 |
Scenario 2 |
|
|
|
||
|
IMPUTE |
0.352 (1.26) |
0.078 (0.493) |
|
MACH |
0.363 (1.27) |
0.093 (0.543) |
|
PLINK |
0.509 (1.55) |
0.054 (0.617) |
|
fastPHASE |
0.483 (1.70) |
0.046 (0.633) |
|
|
||
|
aDifference = (imputed data -log10(p-value)) - (complete data -log10(p-value)) |
||
|
Biernacka et al. BMC Proceedings 2009 3(Suppl 7):S5 |
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