Table 1

Analysis of non-chromosome 6 SNPs using all subjects

SNP ID

Chromosome

Location (bp)

FP (p-value)

Genotype-based χ2 (p-value)


rs2476601

1

114089610

<0.0001

<0.0001

rs2900180a

9

120785936

0.003

0.014

rs3761847

9

120769793

0.006

0.031

rs881375

9

120732452

0.011

0.046

rs2671692

10

49767825

0.011

0.057

rs1953126

9

120720054

0.012

0.053

rs10760130

9

120781544

0.013

0.064

rs4921720

8

20397678

0.024

0.123

rs11204117

8

20396191

0.026

0.131

rs10106243

8

20388180

0.031

0.153

rs1446585

2

136241211

0.034

0.163

rs10985073

9

120723409

0.035

0.165


aAlso significant using FP test only on individuals with shared epitopes.

Matthews et al. BMC Proceedings 2009 3(Suppl 7):S12  

Open Data