Table 3

Allosteric parameters for the different models
Triangle 000 010 011 100 110 111
General
R3 0.7 0.7 0.7 ={010} ={011} 0.7
S1 0 0 1 0 0 0
No cooperation
R1 1 1 1 1 1 1
R2 1 1 1 1 1 1
Substrate activation
R1 0.7 0.7 0 0.5 0.5 0
R2 1 0.7 0.5 0 0 0
Product activation
R1 0 1 0 1 1 0
R2 0 1 1 0 0 0

The first column represents the neighbourhood composition (compare to Figure 1) and columns two to six represent different phosphorylation states of the models and their allosteric parameter. The section labelled ‘General’ contains the model independent allosteric parameters, whereas the other three sections show the parameters for their respective models.

Liebal et al.

Liebal et al. BMC Systems Biology 2013 7:3   doi:10.1186/1752-0509-7-3

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