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This article is part of the supplement: The International Conference on Intelligent Biology and Medicine (ICIBM): Systems Biology

Open Access Research

Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum

Hong Cai1, Changjin Hong2, Jianying Gu3, Timothy G Lilburn4, Rui Kuang2* and Yufeng Wang15*

Author Affiliations

1 Department of Biology, University of Texas at San Antonio, San Antonio, TX 78249, USA

2 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA

3 Department of Biology, College of Staten Island, City University of New York, Staten Island, NY 10314, USA

4 Department of Bacteriology, American Type Culture Collection, Manassas, VA 20110, USA

5 South Texas Center for Emerging Infectious Diseases, University of Texas at San Antonio, San Antonio, TX 78249, USA

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BMC Systems Biology 2012, 6(Suppl 3):S5  doi:10.1186/1752-0509-6-S3-S5

Published: 17 December 2012

Additional files

Additional file 1:

Functional orthologs involved in transcriptional regulation in P. falciparum. The query genome is P. falciparum, and the target genome is E. coli. GO: Gene Ontology. BP: Biological Process. MF: Molecular Function. CC: Cellular Component.

Format: XLSX Size: 127KB Download file

Open Data

Additional file 2:

The protein-protein associations involving 11 ApiAP2 transcriptional regulators in P. falciparum.

Format: XLSX Size: 14KB Download file

Open Data