Table 8

specificity/sensitivity/F-measure results on the two testing PPI networks with CYC-2008 and GO-CC benchmark complexes on Krogan_2006

MCL

MCODE

CFinder

COACH

CODEC-w0

CODEC-w1

Our method


CYC_2008

Specificity

0.333

0.226

0.800

0.047

0.324

0.502

0.740

Sensitivity

0.520

0.048

0.600

0.822

1.000

1.000

1.000

F-Measure

0.406

0.080

0.686

0.088

0.489

0.668

0.850

GO_CC

Specificity

0.265

0.231

0.739

0.026

0.298

0.443

0.729

Sensitivity

0.900

0.105

0.723

0.685

0.999

0.999

0.977

F-Measure

0.409

0.145

0.731

0.051

0.458

0.614

0.835


Cai et al. BMC Systems Biology 2012 6(Suppl 3):S4   doi:10.1186/1752-0509-6-S3-S4

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