Table 6

Number and average size of predicted clusters from different methods on the two testing PPI networks (exclude singleton clusters)

MCL

MCODE

CFinder

COACH

CODEC-w0

CODEC-w1

Our method


Gavin_2006

No. of clusters

223

100

65

612

1082

1005

461

Ave. size

11.5

12.1

16.4

78.1

17.3

13.8

5.1

Krogan_2006

No. of clusters

379

73

73

1927

8348

2973

588

Ave. size

14.1

25.2

15.1

181.8

16.1

16.2

5.0


Cai et al. BMC Systems Biology 2012 6(Suppl 3):S4   doi:10.1186/1752-0509-6-S3-S4

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