Table 5

List of "Jak-STAT signaling pathway (hsa04630)" genes with gene-wise association P < 0.001 in CGEMS prostate cancer GWAS data.

Gene symbol

Most significant SNP

Chr.

Position (bp)

Genomic region

P


MYC

rs7837688

8

128539360

Intron

4.96 × 10-7

CSF2RB

rs909486

22

37323988

Intron

1.85 × 10-4

PIAS1

rs11071981

15

68416575

Intron

2.63 × 10-4

IL2RA

rs3118470

10

6101713

Intron

3.29 × 10-4

SPRY2

rs1999494

13

81000505

Intron

4.01 × 10-4

LEP

rs12538332

7

127839654

Intron

5.24 × 10-4


Chr.: chromosome. bp: base pair.

Jia et al. BMC Systems Biology 2012 6(Suppl 3):S13   doi:10.1186/1752-0509-6-S3-S13

Open Data