Table 2

Statistics on the information in SigCS base

No.

Stroke or Etiology

# of Genes

# of Variants

# of Sig. Pathways*


1

Stroke

236

1609

18

2

Atherosclerosis

200

891

19

3

Cardiovascular disease

143

501

9

4

Coagulation, blood

47

732

19

5

Estrogen

353

851

6

6

Hypercysteinemia

90

118

2

7

Hyperlipidemia

102

333

10

8

Hypertension

521

2177

13

9

Intracranial arteriovenous malformations (including intracranial aneurysm)

60

182

11

10

Inflammation

696

1354

94

11

Obesity

412

1121

27

12

Diabetes mellitus, type 2

208

1603

19

Total

Stroke + All etiologies

3068(1943)

11472

247(165)


* Pathways with the FDR q-values of less than 0.05.

† Numbers in ( ) are counts for non-redundant genes or pathways over the etiologies.

Park et al. BMC Systems Biology 2011 5(Suppl 2):S10   doi:10.1186/1752-0509-5-S2-S10

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