Table 1

List of signature metabolites that were changed in 14-3-3 overexpression plants compared to wild type plants.


Fold change compared to wild type plants


Metabolite

kappa-ox1

kappa-ox2

kappa-ox3

kappa-KO

chi-ox1

chi-ox2

chi-ox3

chi-KO

psi-ox1

psi-ox2

psi-ox3

psi-RNAi


Shoot

β-alanine

0.613

0.741

0.628

1.401

0.809

0.912

1.002

1.642

1.662

1.296

0.999

2.087


GABA

0.682

0.527

0.440

1.271

0.627

0.886

0.647

0.836

1.101

0.571

0.578

0.758


threonic acid

0.616

0.657

0.641

1.178

1.106

1.324

0.859

0.945

0.973

0.662

0.869

1.524


phenylalanine

0.746

0.764

0.572

1.050

0.702

0.798

1.032

1.009

1.102

0.813

0.692

0.793


1,3-diaminopropane dihydrochloride

0.546

0.496

0.413

0.875

0.439

0.485

0.478

0.711

0.761

0.574

0.473

0.552


ribose

0.747

0.618

0.415

1.501

0.651

0.929

0.809

1.110

1.358

0.876

0.740

1.102


citrate

0.825

0.735

0.733

1.154

0.444

0.654

0.538

0.799

1.222

0.595

0.670

0.712


fructose

0.439

0.447

0.479

0.771

0.335

0.419

0.426

0.904

0.670

0.500

0.461

0.914


tyrosine

0.639

0.684

0.323

0.681

1.013

1.107

1.082

0.991

1.687

1.036

0.969

1.130


glycine

0.448

0.402

0.364

0.984

0.517

0.485

0.722

0.786

1.384

0.935

0.640

0.704


aspartate

0.860

0.707

0.648

1.936

0.764

1.115

1.068

1.535

1.258

1.027

0.926

1.181


pyroglutamate

0.855

0.833

0.590

1.709

0.775

1.008

1.041

1.444

1.051

0.873

0.758

0.869


glutamate

0.921

1.044

0.766

1.734

0.850

1.089

0.934

1.375

1.132

1.046

0.935

1.083


asparagine

0.922

0.561

0.350

2.059

0.762

1.338

0.979

1.393

1.351

0.917

0.710

1.363


glutamine

0.697

0.439

0.214

0.858

0.696

0.986

0.703

0.578

1.484

1.213

0.743

1.283


glucose

0.451

0.387

0.278

0.723

0.294

0.335

0.336

0.530

0.567

0.475

0.360

0.720


lysine

0.892

0.687

0.374

1.052

0.919

1.207

1.041

1.069

1.069

0.908

0.729

1.016


sucrose

0.550

0.454

0.354

0.647

0.489

0.721

0.603

0.820

0.501

0.550

0.251

0.681


palmitate

0.813

1.013

0.984

1.193

0.878

0.922

1.069

1.231

0.986

0.919

0.804

0.904


shikimate

0.846

0.722

0.602

1.801

0.788

0.776

0.678

1.322

1.073

0.965

0.718

0.950


1,4-diaminobutane

0.609

0.561

0.484

0.953

1.333

1.522

0.986

0.973

0.912

0.775

0.917

1.758


Fructose-6-phosphate

1.156

0.800

0.678

1.655

0.642

0.879

0.942

1.108

1.089

0.967

0.771

1.071


malate

0.745

0.665

0.642

1.017

0.674

0.866

0.809

0.847

1.452

0.911

0.955

1.008


α-ketoglutarate

0.566

0.991

0.546

0.653

0.465

0.701

0.657

0.583

3.061

1.869

2.120

1.111


myo-inositol

0.746

0.969

0.562

1.487

1.251

1.039

0.805

1.275

0.971

0.933

0.865

1.181


Root

β-alanine

0.662

0.830

0.647

1.331

0.649

0.617

0.703

0.891

1.009

0.621

0.749

1.153


phenylalanine

0.739

0.742

0.509

1.314

0.697

0.792

0.842

1.158

0.964

0.849

0.722

0.880


proline

2.282

1.578

0.762

1.301

2.046

1.700

1.254

1.908

2.318

1.678

3.929

2.340


pyroglutamate

0.755

0.734

0.525

1.341

0.751

0.836

0.852

1.250

0.923

0.775

0.529

0.801


glutamate

0.685

0.875

0.546

1.237

0.741

0.766

0.788

1.077

1.055

0.815

0.762

0.964


trans-Sinapate

0.447

0.751

0.409

0.697

0.616

0.553

0.516

0.567

0.643

0.690

0.470

0.723


palmitate

0.742

0.945

0.814

1.103

0.800

0.784

0.864

1.060

0.992

0.912

0.723

0.845


1,4-diaminobutane

0.960

0.935

0.767

1.645

0.635

0.736

0.857

0.985

1.112

0.794

0.933

1.209


Fructose-6-phosphate

0.780

0.751

0.538

1.251

0.780

0.860

0.790

1.059

0.906

0.779

0.598

0.908


shikimate

1.946

1.912

1.702

3.127

1.553

1.666

1.811

1.979

2.161

1.733

1.909

2.311


myo-inositol

0.716

0.806

0.626

1.385

0.909

0.763

0.821

1.249

0.980

0.867

0.699

1.043


phytol

0.179

0.438

0.141

1.137

0.233

0.154

0.219

1.089

0.374

0.418

0.167

0.266


Bold letter indicates statistically significant in metabolite level in the line compared to wild type (P < 0.05).

Diaz et al. BMC Systems Biology 2011 5:192   doi:10.1186/1752-0509-5-192

Open Data