Table 1

Number of nodes in the networks of OC-associated elements NW1000 and NW5000

NW1000

NW5000


miRNAs

162

162


miRNA targets (OC cancer genes)

131

131


Transcription factors

237

244


Transcription co-factors

140

140


Edges miRNA→ target

434

434


Edges TF → miRNA

5327

14720


Protein-protein-interactions

4382

4409


Total edges

10143

19563


Total nodes

651

658


The table shows the number of different nodes in the constructed networks. NW1000 concentrates on regulatory elements in the core promoter while NW5000 attempts to also include more distally located regulatory elements.

Schmeier et al. BMC Systems Biology 2011 5:183   doi:10.1186/1752-0509-5-183

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