Table 1

Overview of iPC815.

Category

Subsystem

Number


Genes

815

Proteins

678

Metabolites

Cytoplasm

873

Periplasm

398

External

281

Unique

963

Total

1552

Metabolic Reactions

Cytoplasm

932

Periplasm

133

GPR-associated

1539

Non-GPR-associated

139

Unique

1678

Transport Reactions

Periplasm <=> External

281

Cytoplasm <=> Periplasm

332

Exchange Reactions

281

Biomass Objective Functions

2

Total Reactions

1961


To compile the number of unique metabolites, identical compounds appearing in more than one compartment were only counted once. Unique metabolic reactions encompass all reactions except exchange reactions and biomass objective functions.

Charusanti et al. BMC Systems Biology 2011 5:163   doi:10.1186/1752-0509-5-163

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