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TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks

Paul A Jensen, Kyla A Lutz and Jason A Papin*

Author Affiliations

Department of Biomedical Engineering, University of Virginia, Charlottesville, VA 22908, USA

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BMC Systems Biology 2011, 5:147  doi:10.1186/1752-0509-5-147

Published: 23 September 2011

Additional files

Additional file 1:

Supplementary Methods. Detailed grammar for TIGER rules and specifics on the rule to MILP conversion process.

Format: PDF Size: 167KB Download file

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Open Data

Additional file 2:

TIGER source code. Source code, documentation, and tutorials are also available online at http://bme.virginia.edu/csbl/downloads/ webcite or http://csbl.bitbucket.org/tiger webcite.

Format: GZ Size: 1.9MB Download file

Open Data