Table 3

Extracellular metabolite concentrations used in the model

Metabolite

Concentration (mM)


4-Aminobenzoate

0.0015

L-Arginine

1

L-Aspartate

1

Biotin

8.2 × 10-5

Citrate

1

Fumarate

1

D-Glucose

11.1

L-Glutamate

1

L-Histidine

1

myo-Inositol

0.055

potassium

7.11

L-Leucine

1

L-Lysine

1

L-Malate

1

L-Methionine

1

Sodium

1.71

Ammonium

38

(R)-Pantothenate

0.0042

Pyridoxine

0.0019

Pyruvate

1

Riboflavin

5.3 × 10-4

L-Serine

1

Sulfate

42.2

Succinate

1

Thiamin

0.0012

L-Threonine

1

L-Tryptophan

1

L-Valine

1


Values are as defined in the "metabolic footprinting" medium [16].

Smallbone et al. BMC Systems Biology 2010 4:6   doi:10.1186/1752-0509-4-6

Open Data