Methodology article
A possibilistic framework for constraint-based metabolic flux analysis
-
* Corresponding author: Francisco Llaneras frallaes@doctor.upv.es
Instituto de Automática AI2, Universidad Politécnica de Valencia, Camino de Vera s/n, 46022, Spain
BMC Systems Biology 2009, 3:79 doi:10.1186/1752-0509-3-79
Published: 31 July 2009Additional files
Additional file 1:
Realistic example. Additional material related with the experimental case study with C. glutamicum. This includes a list of reactions and metabolites, the stoichiometric matrix and measurements data. Numerical results of the four examples described in the article are also included.
Format: XLS Size: 613KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 2:
Code for solving a simple example. Simple MATLAB script solving example 1; it computes the maximum possibility flux vector and the marginal possibility distribution for v6. Format: Matlab Script (m). Further details are given in http://science.ensilicio.com/PMFA/PMFA.html webcite
Format: M Size: 1KB Download file