Research article
13C-metabolic flux ratio and novel carbon path analyses confirmed that Trichoderma reesei uses primarily the respirative pathway also on the preferred carbon source glucose
-
* Corresponding author: Paula Jouhten paula.jouhten@vtt.fi
1 VTT Technical Research Centre of Finland, Espoo, Finland
2 Department of Computer Science, University of Helsinki, Helsinki, Finland
BMC Systems Biology 2009, 3:104 doi:10.1186/1752-0509-3-104
Published: 29 October 2009Additional files
Additional file 1:
Pathways discovered in ReTrace carbon path analysis. Graphical and tabular representations of amino acid synthesis pathways discovered in ReTrace carbon path analysis [21]. Self-contained web site: unpack zip archive and open index.html with a web browser.
Format: ZIP Size: 1002KB Download file or display content in a new window
Additional file 2:
Estimation of subcellular localization of key enzymes by TargetP. TargetP machine learning program [33,34] was used to predict the subcellular localization of key enzymes of amino acid biosynthetic routes in T. reesei. Targeting sequences were predicted for T. reesei sequences that showed the highest homology to the aspartate aminotransferase, acetolactate synthase, serine hydroxymethyltransferase and glycine dehydrogenase in S. cerevisiae.
Format: DOC Size: 50KB Download file
This file can be viewed with: Microsoft Word Viewer