Dissecting the logical types of network control in gene expression profiles

doi:10.1186/1752-0509-2-18

BMC Systems Biology
Volume 2

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Research article

Dissecting the logical types of network control in gene expression profiles

Carsten Marr^*¹^,3 , Marcel Geertz^*² , Marc-Thorsten Hütt¹ and Georgi Muskhelishvili²

¹Computational Systems Biology Group, Jacobs University, Campus Ring 1, 28759 Bremen, Germany

²Molecular Genetics Group, Jacobs University, Campus Ring 1, 28759 Bremen, Germany

³Institute for Bioinformatics and Systems Biology, Helmholtz Zentrum München – German Research Center for Environmental Health, 85764 Neuherberg, Germany

author email corresponding author email* Contributed equally

BMC Systems Biology 2008, 2:18doi:10.1186/1752-0509-2-18


Published:	19 February 2008

Additional files

Additional file 1:

Dataset S1. Gene identifier and corresponding edge lists of the seven directed effective TRNs emerging from the analysis of the seven transcript profiles.

Format: TXT Size: 24KB Download file

Additional file 2:

Dataset S2. Gene identifier and corresponding edge lists of the eight undirected GPNs emerging from the seperated analysis of the four inter-strain transcript profiles with positive and negative log ratio, respectively.

Format: TXT Size: 48KB Download file