Research article
New insights about host response to smallpox using microarray data
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* Corresponding author: Gustavo H Esteves gesteves@vision.ime.usp.br
1 BIOINFO, Instituto de Matemática e Estatística, Universidade de São Paulo, Brazil
2 Laboratório de Bioinformática, Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, Brazil
3 Departamento de Estatística, Instituto de Matemática e Estatística, Universidade de São Paulo, Brazil
4 Departamento de Matemática e Estatística, Centro de Ciências e Tecnologia, Universidade Estadual da Paraíba, Brazil
BMC Systems Biology 2007, 1:38 doi:10.1186/1752-0509-1-38
Published: 24 August 2007Additional files
Additional file 1:
Contribution of each molecule for the time course active modules analysis. The contributions of individual molecules for each significantly altered module in the time course analysis. The contributions are represented by scores and the respective p-values.
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Additional file 2:
Contribution of each molecule for the ED and LD active modules analysis. The contributions of individual molecules for each significantly altered module in the early and late death analysis. The contributions are represented by scores and the respective p-values.
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Additional file 3:
Relevance networks for module ECM receptor + CAMs of day0 vs. day1–3 analysis. Edges from the graphs in first page (day 0) and second page (days 1–3) represent significant (p < 10-3) negative (green) or positive (red) correlation values. In the last graph (third page), instead of correlation, the edges represent the p-values of the significantly changes of the correlations.
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Additional file 4:
Relevance networks for module ECM receptor + CAMs of day0 vs. day4–6 analysis. Edges from the graphs in first page (day 0) and second page (days 4–6) represent significant (p < 10-3) negative (green) or positive (red) correlation values. In the last graph (third page), instead of correlation, the edges represent the p-values of the significantly changes of the correlations.
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Additional file 5:
Relevance networks for module Cytokines of day0 vs. day1–3. Edges from the graphs in first page (day 0) and second page (days 1–3) represent significant (p < 10-3) negative (green) or positive (red) correlation values. In the last graph (third page), instead of correlation, the edges represent the p-values of the significantly changes of the correlations. For this module the comparison of day 0 vs. days 4–6 has no statistically significant results.
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Additional file 6:
Modules obtained from KEGG. We have selected 199 groups according to the level 4 of KEGG (updated on 04/17/2006).
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