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Open Access Highly Accessed Research article

Multiple origins of endosymbiosis within the Enterobacteriaceae (γ-Proteobacteria): convergence of complex phylogenetic approaches

Filip Husník1*, Tomáš Chrudimský1 and Václav Hypša12*

Author Affiliations

1 Faculty of Science, University of South Bohemia, Branišovská 31, České Budějovice 37005, Czech Republic

2 Institute of Parasitology, Biology Centre of ASCR, Branišovská 31, České Budějovice 37005, Czech Republic

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BMC Biology 2011, 9:87  doi:10.1186/1741-7007-9-87

Published: 28 December 2011

Additional files

Additional file 1:

Summary of 20 studies on symbionts phylogeny.

Format: DOC Size: 130KB Download file

This file can be viewed with: Microsoft Word Viewer

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Additional file 2:

Additional phylogenetic trees.

Format: DOC Size: 11.1MB Download file

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Additional file 3:

All phylogenetic trees derived from AT-GC and SF datasets. A rar file of all phylogenetic trees obtained under BI, ML and MP from 11 AT/GC datasets, and under ML from five slow-fasted datasets. Trees are in phylip and nexus formats and can be viewed, for example, in TreeView http://taxonomy.zoology.gla.ac.uk/rod/treeview.html webcite or Mesquite http://mesquiteproject.org/mesquite/mesquite.html webcite.

Format: RAR Size: 34KB Download file

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Additional file 4:

List of the taxa and orthologous genes used in the study.

Format: XLS Size: 63KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 5:

Additional phylogenetic trees inferred from CAT and CAT+GTR unconverged chains.

Format: DOC Size: 1.9MB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data