Table 1

List of identified genes selected among active regions

Gene

GeneBank Accession no.

Chr #

Position of active regions

Length (bp)

# of CpG islands

Gene description


TAS1R3

XM_371210

1

1304459 to 1305587

1,128

1

taste receptor, type 1, member 3

PRKCZ

NM_002744

1

2143904 to 2144365

461

0

PKC, zeta

TP73

NM_005427

1

3582480 to 3584936

2,456

1

tumor protein p73

SMYD3

NM_022743

1

242463744 to 242466254

2,510

1

SET and MYND domain containing 3

EGR1

NM_001964

5

137830566 to 137831545

979

1

early growth response 1

TRPA1

NM_007332

8

73149159 to 73150095

936

1

transient receptor potential cation channel, subfamily A, member 1

B4GALNT4

NM_178537

11

352950 to 353975

1,025

0

beta1,4-N-acetylgalactosaminyltransferases IV

SCT

NM_021920

11

617138 to 618042

904

1

secretin

DDIT3

NM_004083

12

56201552 to 56202131

579

0

DNA-damage-inducible transcript 3

MMP17

NM_016155

12

130978656 to 130979436

780

1

matrix metalloproteinase 17

MMP15

NM_002428

16

56617452 to 5661737

285

1

matrix metalloproteinase 15

PRKCA

NM_002737

17

61729105 to 61729712

607

1

PKC, alpha

CD7

NM_006137

17

77870114 to 77871217

1,103

1

CD7 antigen (p41)

LGAL7

NM_002307

19

43973066 to 43974116

1,050

1

Galectin-7

MMP11

NM_005940

22

22439567 to 22439961

394

1

matrix metalloproteinase 11

TIMP3

NM_000362

22

31518100 to 31518635

535

0

tissue inhibitor of metalloproteinase 3


Lavoie et al. BMC Biology 2011 9:31   doi:10.1186/1741-7007-9-31

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