Table 1

Summary of recovery of pyrosequencing tags for Framvaren (FV) and Cariaco (CAR) samples, along with accompanying metadata.

Sample number-sample name

1-FV1

2-FV2

3-FV3

4-FV4

5-CAR1

6-CAR2

7-CAR3

8-CAR4


N 454-reads total

38735

34171

24217

33962

35267

30277

28305

26714

Total eukaryotic tags > 100 bp

38280

32026

16256

32795

32876

22503

24266

23591

Unique eukaryotic tags

4280

5283

3765

5141

5983

5701

4325

4016

Total protistan tags (incl. Fungi)

23722

29402

12864

26543

30161

14453

7166

5969

Unique protistan tags (incl. Fungi)

3220

4825

3204

4439

5597

4616

2152

2070

Total and (unique) unassignable tags at 85%

1338

1153

1178

9189

2255

1724

1768

1042

(276)

(468)

(427)

(758)

(620)

(580)

(556)

(365)

Total and (Unique) Archaeal tags

0 (0)

2 (2)

2(1)

2 (2)

0 (0)

4 (3)

6 (5)

2 (2)

Total and (Unique) Bacterial tags

0 (0)

0 (0)

1 (1)

0 (0)

0 (0)

0 (0)

0 (0)

0 (0)

Latitude/Longitude

58°09'N

58°09'N

58°11'N

58°09'N

10°30'N

10°30'N

10°40'N

10°30'N

06°45'E

06°45'E

06°45'E

06°45'E

64°40'W

64°40'W

65°35'W

64°40'W

Temperature °C

10.7

8.4

8.1

5.8

17.9

17.7

17.6

17.6

Depth (m)

20

36

36

36

250

300

320

300

Salinity [80]

27

28

27.5

25.5

36.4

36.4

36.4

36.4

Nitrate (μmol/l)

---

---

---

---

5.22

nd

nd

0.02

Silicate (μmol/l)

---

---

---

100

31

39

41

43

Ammonium (μmol/l)

0.22

2.2

---

2.2

0.12

1.27

2.4

3.2

O2 (μmol/l)

nd

nd

nd

nd

nd

nd

nd

nd

H2S (μmol/l)

nd

668

362

600

nd

1.49

3.74

4.28

Bacteria (× 106 cells/ml)

4.6

0.78

0.43

0.61

0.487

0.149

0.18

0.244

Bact Production (H3-Leu, mg/m2/d)

670

160

----

----

347

353

1305

61

Chlorophyll a (μg/l)

1.22

nd

nd

nd

nd

nd

nd

nd

DNA conc (ng/μl)

160

170

170

120

5.58

4.55

9.12

10.34

Water volume sampled (/)

15

20

20

20

7

7

7

5

Sampling date

Sept-2005

Sept-2005

Sept-2005

May-2004

Jan-2005

Jan-2005

Jan-2005

May-2005


Nd = not detectable.

--- = not available

Stoeck et al. BMC Biology 2009 7:72   doi:10.1186/1741-7007-7-72

Open Data