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Open Access Research article

Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin

Markus Sällman Almén, Karl JV Nordström, Robert Fredriksson and Helgi B Schiöth*

Author Affiliations

Department of Neuroscience, Functional Pharmacology, Uppsala University, Uppsala, Sweden

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BMC Biology 2009, 7:50  doi:10.1186/1741-7007-7-50

Published: 13 August 2009

Additional files

Additional file 1:

The table contains the International Protein Index (IPI) accession numbers and classification for the final membrane protein dataset together with predictions by Phobius, SOSUI, and TMHMM.

Format: XLS Size: 2.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

ZIP-archive containing FASTA files for all classes and a BLAST database for the entire dataset.

Format: ZIP Size: 5.2MB Download file

Open Data

Additional file 3:

A short user guide for searching and further analysis of the dataset and classification.

Format: DOC Size: 40KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 4:

This text describes putative novel protein families and members of existing families.

Format: DOC Size: 57KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data