Table 1 |
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Potential interactors in the nucleosome assembly and regulation pathway.a |
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Proteinb |
PlasmoDB |
PfCK2β1HA (3D7/tagged)c |
PfCK2β2HA (3D7/tagged)c |
|
|
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|
PfCK2α |
MAL13P1.237 |
1/161 |
1/188 |
|
|
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|
PfCK2β1 |
PF11_0048 |
1/31 |
1/24 |
|
|
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|
PfCK2β2 |
PF13_0232 |
0/37 |
0/33 |
|
|
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|
PfNapL |
PFL0185c |
0/3 |
0/3 |
|
|
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|
PfNapS |
PFI0930c |
0/4 |
0/2 |
|
|
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|
Histone H2A |
PFF0860c |
0/35 |
Xd |
|
|
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|
Histone H2A variant |
PFC0920w |
2/25 |
2/6 |
|
|
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|
Histone H2B |
PF11_0062 |
2/11 |
2/3 |
|
|
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|
Histone H2B variant |
PF07_0054 |
0/4 |
X |
|
|
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|
Histone H3 |
PFF0510w |
3/13 |
3/5 |
|
|
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|
Hhistone H4 |
PF11_0061 |
2/11 |
X |
|
|
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|
High mobility group protein |
MAL8P1.72 |
0/2 |
X |
|
|
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|
Chromodomain helicase DNA-binding protein |
PF10_0232 |
0/3 |
0/6 |
|
|
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|
Smarca-related protein |
PFF1185w |
0/8 |
0/2 |
|
|
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|
Structure-specific recognition protein |
PF14_0393 |
0/2 |
X |
|
|
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|
PfAlba1 |
PF08_0074 |
6/12 |
6/7 |
|
|
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|
PfrAlba2 |
MAL13P1.233 |
0/2 |
X |
|
|
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|
PfAlba3 |
MAL13P1.237 |
2/9 |
2/4 |
|
|
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|
PfAlba4 |
PF10_0063 |
2/6 |
X |
|
|
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aProteins found in the HA-PfCK2β1 and HA-PfCK2β2 immunoprecipitates, which are part of the 'nucleosome assembly and regulation pathway' described in the MPMP website, or have been implicated in chromatin dynamics. bData are taken from Additional Tables A2 and A3, which display the entire list of recovered proteins. cFor each column, the unweighted spectrum count is given first for the immunoprecipitate obtained from 3D7 wild-type parasite, and then from the transgenic parasites expressing HA-tagged PfCK2β1or PfCK2β2. dX signifies that the protein was not found in the immunoprecipitate. |
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Dastidar et al. BMC Biology 2012 10:5 doi:10.1186/1741-7007-10-5 |
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