Table 19

Performance measures of SVM early integration (SO) for S2783 data set with reject option.

cv

test

λ

α

Acc.

Prec.

Recall

FP Rate

Reject

Acc.

Prec.

Recall

FP Rate

Reject

2

1

0.829

0.793

0.602

0.071

0.000

0.831

0.788

0.615

0.073

0.000

2

2

0.834

0.813

0.582

0.059

0.024

0.839

0.816

0.596

0.058

0.025

2

5

0.840

0.839

0.544

0.043

0.059

0.845

0.844

0.560

0.042

0.060

5

1

0.842

0.815

0.599

0.058

0.064

0.847

0.821

0.615

0.057

0.066

5

2

0.848

0.839

0.569

0.044

0.092

0.852

0.844

0.587

0.044

0.094

5

5

0.854

0.871

0.531

0.029

0.122

0.857

0.874

0.545

0.030

0.127

10

1

0.884

0.839

0.735

0.058

0.298

0.884

0.844

0.743

0.058

0.303

10

2

0.891

0.863

0.712

0.043

0.322

0.892

0.870

0.717

0.042

0.329

10

5

0.897

0.863

0.621

0.028

0.364

0.894

0.885

0.620

0.031

0.371

Özen et al. BMC Structural Biology 2009 9:66   doi:10.1186/1472-6807-9-66