Table 3 |
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|
Evaluation of the Real-SPINE and NetSurfP method on subsets of residues from the CB511 dataset predicted with high reliability. |
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|
Real-SPINE |
NetSurfP |
||||||||
|
|
|||||||||
|
%Top |
N |
RSA |
ASA |
P-RSA |
M-RSA |
RSA |
ASA |
P-RSA |
M-RSA |
|
|
|||||||||
|
10 |
8372 |
0.73 |
0.74 |
0.16 |
0.18 |
0.77 |
0.79 |
0.35 |
0.35 |
|
20 |
16745 |
0.73 |
0.74 |
0.16 |
0.18 |
0.79 |
0.79 |
0.31 |
0.31 |
|
25 |
20931 |
0.73 |
0.74 |
0.17 |
0.19 |
0.79 |
0.79 |
0.30 |
0.30 |
|
50 |
41863 |
0.72 |
0.74 |
0.18 |
0.20 |
0.77 |
0.77 |
0.28 |
0.28 |
|
75 |
62795 |
0.71 |
0.73 |
0.22 |
0.24 |
0.74 |
0.75 |
0.28 |
0.28 |
|
80 |
66981 |
0.71 |
0.73 |
0.23 |
0.25 |
0.73 |
0.74 |
0.28 |
0.28 |
|
90 |
75354 |
0.70 |
0.73 |
0.25 |
0.27 |
0.72 |
0.73 |
0.28 |
0.28 |
|
100 |
83727 |
0.70 |
0.73 |
0.27 |
0.29 |
0.70 |
0.72 |
0.29 |
0.29 |
|
|
|||||||||
|
%Top and N give the percentage and number of residues selected. RSA and ASA give the Pearson's correlation between predicted and target for relative and absolute surface areas, respectively. P-RSA, and M-RSA give the mean predicted and mean measured RSA values, respectively, on the selected subset of residues. |
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|
Petersen et al. BMC Structural Biology 2009 9:51 doi:10.1186/1472-6807-9-51 |
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