|
Summary of performance of the DFMAC function on the training and test decoy sets. |
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| target set |
Nall |
Nn |
Nnn |
Cα RMSD |
Z-score |
C.C. |
F.E.(%) |
RB1 |
logPB1 |
RB10 |
logPB10 |
C.C.decoy |
F.E.decoy(%) |
|
|
|||||||||||||
| training set |
154 |
115 |
135 |
0.764 |
2.552 |
0.539 |
38.9 |
171.3 |
-0.78 |
36.1 |
-1.38 |
0.499 |
27.6 |
| test set |
77 |
59 |
68 |
1.174 |
2.630 |
0.559 |
38.7 |
164.0 |
-0.75 |
15.8 |
-1.41 |
0.518 |
25.1 |
|
Summarized values are shown by the respective decoy sets. The numbers of total target proteins evaluated (Nall), and correct identification of the native (Nn) or near-native (Cα RMSD < 2 Å) (Nnn) structures are shown. The Cα RMSD, Z-score, C.C., F.E., RB1, logPB1, RB10, logPB10, C.C.decoy, F.E.decoy are the average of the respective scores of the target proteins evaluated. The definition of each index is described in Methods. | |||||||||||||
Makino and Itoh BMC Structural Biology 2008 8:46 doi:10.1186/1472-6807-8-46 |
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