Research article
CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations
1 National Centre for Biological Sciences (TIFR), UAS-GKVK Campus, Bellary Road, Bangalore 560 065, India
2 Mathematical modeling and Computational Biology group, Centre for Cellular and Molecular Biology, Hyderabad, India
3 Laboratoire de Biochimie et Génétique Moléculaire, Université de La Réunion, La Réunion, France
4 Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
BMC Structural Biology 2008, 8:28 doi:10.1186/1472-6807-8-28
Published: 31 May 2008Additional files
Additional file 1:
CUSP: an algorithm to distinguish structurally conserved and unconserved protein domain alignments and its application in the study of large length variations. The data provided represent the various analysis carried out to determine and describe the length variation in the dataset (Section I: S1–S5) and also contains an example of the functional implications of indels in Cytochrome C domain superfamily (Section II). Additional figures and tables that support the data in the main text are also included.
Format: PDF Size: 1.1MB Download file
This file can be viewed with: Adobe Acrobat Reader
