Table 1

Sensitivity values estimated from curves. Sensitivity values estimated from the curves (Figure 1) at 1% and 5% error rates (fraction of false positives) are listed for different similarity measures: loop Hausdorff measure (LHM), HCS score (HCS), gapped structural alignment score (GSAS), percent aligned (%aln), percent identity (%id), root mean square deviation (RMSD), and two other structural similarity measures (SI and MI) from [3].

LHM

HCS

GSAS

% aln

% id

RMSD

MI

SI


1% error rate

0.36

0.24

0.26

0.14

0.23

0.17

0.15

0.07

5% error rate

0.59

0.54

0.49

0.45

0.44

0.44

0.43

0.31


Madej et al. BMC Structural Biology 2007 7:23   doi:10.1186/1472-6807-7-23

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