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Open AccessHighly AccessResearch article

Protein secondary structure assignment revisited: a detailed analysis of different assignment methods

Juliette Martin1 email, Guillaume Letellier1 email, Antoine Marin1 email, Jean-François Taly1 email, Alexandre G de Brevern2 email and Jean-François Gibrat1 email

INRA, Unité Mathématiques Informatique et Génome, Domaine de Vilvert, 78352 Jouy en Josas Cedex, France

INSERM U726, Equipe de Bioinformatique Génomique et Moléculaire, Université Paris 7, case 7113, 2 place Jussieu, 75251 Paris cedex 05, France

author email corresponding author email

BMC Structural Biology 2005, 5:17doi:10.1186/1472-6807-5-17

Published: 15 September 2005

Additional files

Additional File 1:

C3 scores for all datasets.

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Additional File 2:

Graphical views of C3 scores for the HRes set.

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Additional File 3:

SOV scores for all datasets.

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Additional File 4:

Length of pairs of helices and strands on separate plots.

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Additional File 5:

Helix geometry analysis on all datasets.

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Additional File 6:

Urls to retrieve the list of structures used in this study.

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Additional File 7:

Φ/Ψ repartition in helices and strands defined by the PDB.

Format: PDF Size: 22KB Download file

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