Table 2

Mouse bladder transcripts isolated by SSHs

Abbrev

Name

Accession

Library

QPCR


2310015N07

RIKEN cDNA 2310015N07 gene

NM_025515

MIDI

N

Actg1

actin, gamma 1, cytoplasmic

NM_009609

MIC

N

Actg2

actin, gamma 2, smooth muscle, enteric

NM_009610

MIDI

N

Actr3

ARP3 actin-related protein 3 homolog (yeast)

NM_023735

MIC

N

Ambladder

adult male urinary bladder cDNA, RIKEN clone:9530014P05

AK020558

MC

N

Amcq

adult male corpora quadrigemina cDNA, RIKEN clone:B230340L02

AK080832

MIC

Y

Aplp2

amyloid beta (A4) precursor-like protein 2 isoform 751

U15571

MIDI

N

Bcap31

B-cell receptor-associated protein 31

NM_012060

MIDI

Y

Calm2

calmodulin 2

NM_007589

MC

N

Catenin

similar to catenin src

BC043108

MIC

N

Cnn1

calponin 1

NM_009922

MC

N

Col3a1

collagen, type III, alpha 1, RIKEN 3200002K15

AK019448

MIDI

N

Cox7b

cytochrome c oxidase subunit VIIb

NM_025379

MIC

N

CoxI

mitochondrial gene for subunit I of cytochrome c oxidase

X57780

MIC

N

Cpe

carboxypeptidase E (Cpe),

NM_013494

MIC

N

Cts e

cathepsin E (Ctse)

NM_007799

MIC

N

Cts h

cathepsin H

NM_007801

DC

N

Cts l

cathepsin L

NM_009984

MIC

Y

Ddx3

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3

NM_010028

MIDI

Y

DnaJ

Hsp40 homolog, subfamily A, member 2

NM_019794

MIDI

N

Eif4ebp2

eukaryotic translation initiation factor 4E binding protein 2

NM_010124

DIC

N

Elp3

elongation protein 3 homolog, RIKEN clone:2610507P14

AK012072

MIDI

Y

Endomuc1

endomucin-1

BC003706

MIC

N

Fth1

ferritin heavy chain 1

NM_010239

MIC

N

Gpam/GPAT

glycerol-3-phosphate acyltransferase

NM_008149

MIC

Y

Grn

epithelin 1 and 2 (granulin)

X62321

MC

N

Grp58

glucose regulated protein

BC003285

MIC

Y

Gst a4

glutathione S-transferase, alpha 4

NM_010357

MIDI

N

Gst m1

glutathione S-transferase, mu 1

NM_010358

DC

Y

Gst o1

glutathione S-transferase omega 1

NM_010362

DC

Y

Gus

beta-glucuronidase

NM_010368

MIDI

N

IFIT3

interferon-induced protein with tetratricopeptide repeats 3

BC003804

MIC

Y

Ifrg15

interferon alpha responsive gene

NM_022329

DC

N

Lamp2

lysosomal membrane glycoprotein 2

NM_010685

MIC

N

Lrrfip2

leucine rich repeat (in FLII) interacting protein 2

XM_284541

MIDI

Y

Ly6d

mRNA for THB / lymphocyte antigen 6 complex, locus D

X63782

MIDI

N

Mafb

transcription factor MAFB

AF180338

MIC

N

Mgs1-182e11

clone mgs1-182e11 strain 129/SvJ

AC096622

MIDI

Y

MLZE

adult female vagina cDNA, RIKEN clone 9930109F21

AK037079

MIDI

N

Mpp1

palmytoylated protein p55

U38196

DIC

N

My h11

myosin heavy chain 11, smooth muscle

XM_147228

MIDI

Y

My lc2b/MRLC2

myosin light chain, regulatory B

NM_023402

MC

Y

My19

myosin, light polypeptide 9, regulatory

XM_283793

MIDI

N

Pls3

similar to plastin 3 precursor (T-isoform)

NM_145629

MIC

Y

Prdx1

peroxiredoxin 1

NM_011034

MIDI

N

Prnp

prion protein

NM_011170

DC

Y

Prss11

protease, serine, 11 (Igf binding) HtrA1

NM_019564

MIC

N

RP23-452N23

clone RP23-452N23 on chromosome 4

AL928645

MIC

N

RP23-70M6

chromosome 18 clone RP23-70M6

AC114820

MIC

N

RPCI23

Strain C57BL6/J Chromosome 2, clone RP23-111A22

AC078911

MIDI

Y

RPs21

ribosomal protein S21 / RIKEN cDNA 2410030A14 gene

BC027563

MIC

N

RPs7

ribosomal protein S7

NM_011300

MIDI

Y

SAC1

suppressor of actin mutations

AJ245720

MC

Y

SC1

extracellular matrix protein precursor

U77330

MC

N

SCP-1

SCP-1 mRNA for stromal cell derived protein-1

D16847

MIC

Y

Sdfr1

stromal cell derived factor receptor 1

NM_009145

DC

N

Sepp1/SePP

selenoprotein P, plasma,1 glycoprotein

NM_009155

MIC

Y

Serpina3n

serine (or cysteine) proteinase inhibitor (clade A, member 3N)

NM_009252

DC

Y

Sf 3b2

splicing factor 3b, subunit 2, clone MGC:61326 IMAGE:6812422

BC049118

MIDI

N

Sf rs6

splicing factor, arginine/serine-rich 6

NM_026499

MIC

N

Sf sc35

splicing factor SC35

AF077858

MIDI

N

Sirt1

Sir1 alpha protein

AF214646

MIDI

N

Siva

Cd27 binding proapoptotic protein

NM_013929

DIC

Y

Smoc2

SPARC related modular calcium binding 2

NM_022315

MIC

N

Sparc

secreted acidic cysteine rich glycoprotein

NM_009242

MIDI

N

Sprr 2A

small proline-rich protein 2A

BC010818

MC

Y

Syn1

synapsin I or ribosomal protein S15a

NM_013680

DIC

Y

Tcra-V13.1

T-cell receptor alpha/delta locus

AE008684

MIC

N

Thsd6

thrombospondin, type I domain containing 6

NM_025629

DC

Y

TMPRSS2

transmembrane protease, serine 2

NM_015775

MIDI

N

Tnnt3

troponin T3, skeletal, fast

NM_011620

MIDI

N

UDP-gluco

UDP-glucuronosyltransferase 1 family, member 2

BC019434

MIC

N

Upk1a

uroplakin 1a

AF262335

DC

N

Upk1b

uroplakin 1b

NM_178924

DC

N

Wdr1

WD repeat domain 1

NM_011715

MIDI

N

Zfp364

zinc finger protein 364/Rab7

NM_026406

MIDI

N


Saban et al. BMC Physiology 2006 6:1   doi:10.1186/1472-6793-6-1

Open Data