Table 1 |
||||||
| Taxonomic classification of the 76 species from marine eight metazoan phyla (plus one alga species) sequenced with the primers LoboF1 and LoboR1 | ||||||
| Species analyzed in this project | Species from the BLAST search | |||||
| Kingdom | Phylum | Class | Order | Genus/Species | Specimen / similarity (%) | GenBank Accession |
| Animalia | Annelida | Polychaeta | Axiothella constricta | Nicolea zostericola / 80 | HQ024409 | |
| Euclymene sp. | Maldanidae sp. / 81 | HQ023886 | ||||
| Euclymene robusta | Hyalinoecia sp. / 79 | GQ497524 | ||||
| Euclymene santandarensis | Axiothella rubrocincta / 82 | HM473326 | ||||
| Leiochone leiopygos | Axiothella rubrocincta /83 | HM473326 | ||||
| Praxillella praetermissa | Axiothella rubrocincta / 80 | HM473326 | ||||
| Unidentified Orbiniidae | Naineris laevigata / 77 | GU362690 | ||||
| Sabellida | Sabella pavonina | Branchiomma sp. / 87* | ACF75771 | |||
| Spionida | Scolelepis (Scolelepis) foliosa | Spionidae sp. / 81 | GU672502 | |||
| Phyllodocida | Glycera alba | Glycera sp. / 78 | HM473389 | |||
| Hediste diversicolor | Hediste diversicolor / 98 | FJ030974 | ||||
| Arthropoda | Malacostraca | Decapoda | Deosergestes corniculum | Eusergestes similis / 85 | DQ882149 | |
| Porcellana platycheles | Anomura sp. / 87 | HM464308 | ||||
| Pestarella tyrrhena | Anomura sp. / 84 | HM465098 | ||||
| Calappa granulata | Calappa granulata / 99 | JQ306054 | ||||
| Calappa pelii | Calappa granulata / 99 | JQ306054 | ||||
| Atelecyclus sp. | Cancer bellianus / 86 | JQ306131 | ||||
| Macropodia sp. | Macropodia rostrata / 99 | JQ306016 | ||||
| Pilumnus hirtellus | Pilumnus hirtellus / 94 | JQ306038 | ||||
| Carcinus maenas | Carcinus maenas / 99 | FJ581593 | ||||
| Lophozozymus incisus | Hermodice carunculata / 98 | AY495947 | ||||
| Pinnotheres pisum | Neosarmatium fourmanoiri / 85 | FN392165 | ||||
| Eualus cranchii | Anomura sp. / 85 | HM464348 | ||||
| Oplophorus spinosus | Oplophorus spinosus / 100 | JQ306166 | ||||
| Systellaspis debilis | Systellaspis debilis / 99 | JQ306181 | ||||
| Systellaspis pellucida | Systellaspis pellucida / 99 | JQ306183 | ||||
| Palaemon elegans | Palaemon elegans / 99 | JQ306030 | ||||
| Chlorotocus crassicornis | Chlorotocus crassicornis / 100 | JQ305891 | ||||
| Pandalina brevirostris | Eumunida capillata / 82 | EU243342 | ||||
| Plesionika acanthonotus | Plesionika acanthonotus / 99 | JQ306170 | ||||
| Plesionika heterocarpus | Plesionika heterocarpus / 99 | JQ306279 | ||||
| Stylopandalus richardi | Plesionika narval / 99 | JQ305932 | ||||
| Unidentified Paguridae | Emerita analoga / 83 | AF425302 | ||||
| Amphipoda | Ampithoe sp. | Stenothoidae sp / 86 | EF989710 | |||
| Caprella andreae | Amphipoda sp. / 82 | GQ260853 | ||||
| Corophium sp. | Cerodontha incisa / 80 | EF104689 | ||||
| Elasmopus rapax | Amphipoda sp. / 82 | HM466480 | ||||
| Jassa sp.1 | Jassa staudei / 82 | EU243782 | ||||
| Jassa sp.2 | Jassa marmorata / 83 | EU243747 | ||||
| Maera inaequipes | Amphipoda sp. / 82 | HM465802 | ||||
| Melita palmata | Melita plumulosa / 79 | JN790072 | ||||
| Microdeutopus chelifer | Amphipoda sp. / 83 | HM466455 | ||||
| Isopoda | Idotea granulosa | Idotea baltica / 90 | FJ581714 | |||
| Idotea pelagica | Idotea pelagica / 98 | JQ425512 | ||||
| Talitrus saltator | Pseudorquestoidea brito / 91 | JX094870 | ||||
| Chordata | Ascidiacea | Stolidobranchia | Microcosmus squamiger | Microcosmus squamiger / 100 | FJ528602 | |
| Styela clava | Styela clava / 99 | FJ528636 | ||||
| Actinopterygii | Gobiesociformes | Lepadogaster lepadogaster | Dormitator maculatus / 82 | AY722137 | ||
| Perciformes | Pomatoschistus lozanoi | Pomatoschistus tortonesei / 90 | FJ751922 | |||
| Bassγ | Dicentrarchus labrax / 100 | FN689114 | ||||
| Tunaγ | Thunnus albacares / 99 | GU451782 | ||||
| Pleuronectiformes | Solea senegalensis | Solea senegalensis / 99 | EU513739 | |||
| Cnidaria | Anthozoa | Pennatulacea | Veretillum cynomorium | Funiculina sp. / 96 | JN227949 | |
| Echinodermata | Asteroidea | Forcipulatida | Marthasterias glacialis | Marthasterias glacialis / 99 | DQ077925 | |
| Ophiuroidea | Ophiurida | Ophiothrix fragilis | Ophiothrix fragilis / 98 | EU583122 | ||
| Echinoidea | Camarodonta | Paracentrotus lividus | Paracentrotus lividus / 99 | EF462949 | ||
| Mollusca | Bivalvia | Nuculida | Nucula sulcata | Nucula sulcata / 100 | DQ280017 | |
| Arcoida | Anadara sp. | Anadara diluvii / 99 | JF496763 | |||
| Mytiloida | Mytilus edulis | Mytilus edulis / 100 | GU570521 | |||
| Pectinoida | Anomia ephippium | Anomia sp. / 70 | GQ166573 | |||
| Cephalopoda | Myopsida | Alloteuthis media | Alloteuthis media / 99 | EU668087 | ||
| Loligo forbesi | Loligo forbesi / 100 | AF075402 | ||||
| Loligo vulgaris | Loligo vulgaris / 99 | AF075397 | ||||
| Sepiida | Sepia officinalis | Sepia officinalis / 99 | EF416306 | |||
| Octopoda | Argonauta argo | Argonauta nodosa / 99 | AY557517 | |||
| Gastropoda | Osilinus sauciatus | Osilinus sauciatus / 100 | JN686313 | |||
| Littorinimorpha | Vermetus triquetrus | Peasiella mauritiana / 80 | HE590850 | |||
| Neogastropoda | Nassarius reticulatus | Nassarius reticulatus / 99 | EU827201 | |||
| Ocenebra erinaceus | Ocenebra erinaceus / 100 | AY995773 | ||||
| Nudibranchia | Armina maculata | Dermatobranchus sp. / 85 | HM162698 | |||
| Pleurobranchomorpha | Berthella plumula | Bathyberthella antartica / 84 | AY345027 | |||
| Polyplacophora | Chitonida | Acanthochitona crinita | Acanthochitona crinita / 86 | AF120627 | ||
| Chaetopleura angulata | Chaetopleura angulata / 100 | AY377703 | ||||
| Lepidopleurida | Leptochiton algesirensis | Leptochiton algesirensis / 93 | HQ907849 | |||
| Nemertea | Enopla | Monostilifera | Amphiporus sp. | Amphiporus sp. / 89 | EU255601 | |
| Platyhelminthes | Rhabditophora | Polycladida | Leptoplana tremellaris | Pseudostylochus intermedius / 82* | BAB39492 | |
| Chromista | Ochrophyta | Phaeophyceae | Fucales | Fucus spiralis | Fucus vesiculosus var. spiralis / 100 | EU646757 |
*Amino acid sequence search because poor information is available about these taxa, γindicates common name (muscle tissue was provided without morphological identification to the species level).
Lobo et al.
Lobo et al. BMC Ecology 2013 13:34 doi:10.1186/1472-6785-13-34
