Table 4

Genes differentially expressed in individual OA meniscal cells compared to normal meniscal cells.

Gene

Name

Gene ID

OA1

OA1

OA3

OA4

OA5

Description


BST1

NM_004334

3.9

3.4

3.3

1.6

2.2

bone marrow stromal cell antigen 1


FGF9

NM_002010

3.7

2.4

3.7

2.5

2.9

Fibroblast growth factor 9


ACAN

NM_013227

2.4

1.6

1.6

0.0

1.6

Aggrecan


COL11A1

J04177

0.0

11.5

5.8

2.2

3.6

Collagen, type XI, alpha 1


ANKH

AL833238

0.0

1.8

1.7

1.5

1.8

Ankylosis, progressive homolog (mouse)


MGP

NM_000900

11.8

4.7

21.6

0.0

17.6

Matrix Gla protein


TUFT1

NM_020127

2.8

2.7

1.9

0.0

0.0

Tuftelin 1


TFIP11

NM_012143

2.2

1.6

0.0

0.0

0.0

Tuftelin interacting protein 11


IL20RB

AL578102

2.3

2.7

0.0

2.6

7.8

Interleukin 20 receptor beta


IL26

NM_018402

1.7

1.6

1.6

0.0

3.0

Interleukin 26


COL4A5

AW052179

-3.1

-3.0

-3.1

-3.0

-3.1

Collagen, type IV, alpha 5 (Alport syndrome)


MMP9

NM_004994

-2.2

-2.1

-2.1

0.0

-2.2

Matrix metallopeptidase 9


MMP10

NM_002425

-2.7

-2.6

-2.7

-1.5

-2.6

Matrix metallopeptidase 10


MMP12

NM_002426

-2.1

-2.0

-2.1

0.0

-2.1

Matrix metallopeptidase 12


FZD10

NM_007197

-1.6

-1.5

-1.6

-1.5

-1.5

Frizzled homolog 10 (Drosophila)


CYTL1

NM_018659

-2.6

-2.6

-2.6

-2.6

-2.5

Cytokine-like 1


CHODL

NM_024944

-2.6

-2.6

-2.6

-2.6

Chondrolectin


*Positive number indicates elevated expression (fold) in OA meniscal cells compared to normal meniscal cells. Negative number indicates decreased expression (fold) in OA meniscal cells compared to normal meniscal cells. 0.0 indicates there was no differential gene expression being detected.

Sun et al. BMC Musculoskeletal Disorders 2010 11:19   doi:10.1186/1471-2474-11-19

Open Data