|
Sequences of oligonucleotide primers used in real-time PCR and sequencing reactions |
||
| Primer pairs used in real-time PCR reactions |
||
|
|
||
| Gene |
Primer sequence |
|
|
|
||
| ACTB |
Forward: 5'-TGCGTTACACCCTTTCTTGACA |
|
| Reverse: 5'-GCAAGGGACTTCCTGTAACAATG |
||
| GAPDH |
Forward: 5'-GAAGGTGAAGGTCGGAGTC |
|
| Reverse: 5'-GAAGATGGTGATGGGATTTC |
||
| MT-ATP6 |
Forward: 5'-TAGCCATACACAACACTAAAGGACGA |
|
| Reverse: 5'-GGGCATTTTTAATCTTAGAGCGAAA |
||
| MT-CO1 |
Forward: 5'-GACGTAGACACACGAGCATATTTCA |
|
| Reverse: 5'-AGGACATAGTGGAAGTGAGCTACAAC |
||
| MT-CYB |
Forward: 5'-ATCACTCGAGACGTAAATTATGGCT |
|
| Reverse: 5'-TGAACTAGGTCTGTCCCAATGTATG |
||
| MT-ND1 |
Forward: 5'-CCACCTCTAGCCTAGCCGTTTA |
|
| Reverse: 5'-GGGTCATGATGGCAGGAGTAAT |
||
| MT-ND6 |
Forward: 5'-CAAACAATGTTCAACCAGTAACCACTAC |
|
| Reverse: 5'-ATATACTACAGCGATGGCTATTGAGGA |
||
| MT-RNR1 |
Forward: 5'-TAGAGGAGCCTGTTCTGTAATCGAT |
|
| Reverse: 5'-CGACCCTTAAGTTTCATAAGGGCTA |
||
| UBC |
Forward: 5'-ATTTGGGTCGCGGTTCTTG |
|
| Reverse: 5'-TGCCTTGACATTCTCGATGGT |
||
| Primers used in sequencing reactions |
||
|
|
||
| Primer name |
Primer sequence |
|
|
|
||
| D1F A |
Forward: 5'-AATGGGCCTGTCCTTGTAG |
|
| D2F |
Forward: 5'-CGACATCTGGTTCCTACTTC |
|
| D3F |
Forward: 5'-CGCTTCTGGCCACAGCAC |
|
| L16112F |
Forward: 5'-CACCATGAATATTGTACGGT |
|
| D2R |
Reverse: 5'-GGGTTTGGTTGGTTCGGG |
|
| D3R A |
Reverse: 5'-GGTGTGGCTAGGCTAAGC |
|
| DLP4R |
Reverse: 5'-GTGGAAAGTGGCTGTGCAG |
|
| H16220R |
Reverse: 5'-TTGATTGCTGTACTTGCTTGTAAG |
|
| H16540R |
Reverse: 5'-GTGGGCTATTTAGGCTTTATGACCCTG |
|
|
A Primers used for PCR amplification of sequenced mtDNA fragment. | ||
Bragoszewski et al. BMC Cancer 2008 8:292 doi:10.1186/1471-2407-8-292 |
||